HPDB: Human Pigmentation Database
FAQs


Sl. No. Reference Journal Publication Year Allele Population Sub Population Gene SNP Amino Acid Change Trait Discovery OR (95% CI) Replication 1 OR (95% CI) Replication 2 OR (95% CI) p-Value Chromosome Variant location Variant Type
61 Jonnalagadda et al. American Journal of Human Biology 2016 G>A South Asian Indian SLC24A5 rs1426654 NA Skin color NA NA NA 2.20E-06 15 Exonic NA
American Journal of Human Biology C>A South Asian Indian TYR rs1042602 NA Skin color NA NA NA 3.40E-02 11 Exonic NA
American Journal of Human Biology C>G South Asian Indian SLC45A2 rs16891982 NA Skin color NA NA NA 8.58E-05 5 Exonic Missence
American Journal of Human Biology G>A South Asian Indian ASIP rs6058017 NA Skin color NA NA NA 4.80E+00 20 Intronic NA
American Journal of Human Biology A>G South Asian Indian KITLG rs642742 NA Skin color NA NA NA 8.80E-01 12 NA NA
62 Hernando et al. Biology of Sex Differences 2016 C>A European Spanish ADAM17 rs12473402 NA Hair color NA NA NA NA 2 Intronic NA
Biology of Sex Differences T>C European Spanish ADAM17 rs12992105 NA Eye color NA NA NA NA 2 Intronic NA
Biology of Sex Differences G>A European Spanish ADAM17 rs4258773 NA Eye color NA NA NA NA 2 Intronic NA
Biology of Sex Differences G>A,C,T European Spanish ADAMTS20 rs1510521 NA Eye color NA NA NA NA 12 Intronic NA
Biology of Sex Differences C>T European Spanish ADAMTS20 rs275630 NA Eye color NA NA NA NA 12 Intronic NA
Biology of Sex Differences C>T European Spanish ADAMTS20 rs7297057 NA Eye color NA NA NA NA 12 Intronic NA
Biology of Sex Differences T>A European Spanish AP3B1 rs10514134 NA Hair color NA NA NA NA 5 Intronic NA
Biology of Sex Differences A>G,T European Spanish AP3B1 rs11742673 NA Hair color NA NA NA NA 5 Intronic NA
Biology of Sex Differences G>A,T European Spanish AP3B1 rs11746090 NA Eye color NA NA NA NA 5 Intronic NA
Biology of Sex Differences G>A,T European Spanish AP3B1 rs12657894 NA Eye color NA NA NA NA 5 Intronic NA
Biology of Sex Differences A>G European Spanish AP3B1 rs13172957 NA Eye color NA NA NA NA 5 Intronic NA
Biology of Sex Differences A>G,T European Spanish AP3B1 rs17191796 NA Hair color NA NA NA NA 5 Intronic NA
Biology of Sex Differences C>T European Spanish AP3B1 rs2636986 NA Hair color NA NA NA NA 5 Intronic NA
Biology of Sex Differences G>A European Spanish AP3B1 rs389110 NA Hair color NA NA NA NA 5 Intronic NA
Biology of Sex Differences G>A,C European Spanish AP3B1 rs6453374 NA Hair color NA NA NA NA 5 Intronic NA
Biology of Sex Differences T>C European Spanish AP3D1 rs10413398 NA Eye, Skin color NA NA NA NA 19 Intronic NA
Biology of Sex Differences G>A,C European Spanish AP3D1 rs17604954 NA Skin color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>C,G European Spanish AP3D1 rs7256735 NA Skin color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>C,G European Spanish ASIP rs819133 NA Hair, Skin color NA NA NA NA 20 Intronic NA
Biology of Sex Differences T>A,C European Spanish BCL2 rs1462129 NA Hair color NA NA NA NA 18 Intronic NA
Biology of Sex Differences C>T European Spanish BCL2 rs1564483 NA Hair color NA NA NA NA 18 3 prime UTR NA
Biology of Sex Differences G>A European Spanish BCL2 rs949037 NA Hair color NA NA NA NA 18 Intronic NA
Biology of Sex Differences A>C,G European Spanish BCL2A1 rs11636338 NA Eye color NA NA NA NA 15 Intronic NA
Biology of Sex Differences T>A,G European Spanish BCL2A1 rs17215263 NA Eye color NA NA NA NA 15 Intronic NA
Biology of Sex Differences G>C European Spanish BLOC1S3 rs7253652 NA Hair, Skin color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>C,G European Spanish CDH1 rs1801552 NA Hair color NA NA NA NA 16 Exonic Synonymous
Biology of Sex Differences G>A European Spanish CDK2 rs2069398 NA Eye color NA NA NA NA 12 Exonic Synonymous
Biology of Sex Differences A>G European Spanish CDKN2A rs2518719 NA Skin color NA NA NA NA 9 Exonic Missence
Biology of Sex Differences G>A,C,T European Spanish CDKN2A rs2811712 NA Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences G>A,C European Spanish CDKN2A rs3218020 NA Hair color NA NA NA NA 9 Intronic NA
Biology of Sex Differences A>G European Spanish CDKN2B rs495490 NA Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences G>A,C European Spanish CNO rs4689527 NA Eye color NA NA NA NA 4 NA NA
Biology of Sex Differences C>T European Spanish CTNNBIP1 rs11828 NA Hair color NA NA NA NA 1 Intronic NA
Biology of Sex Differences C>T European Spanish CTNNBIP1 rs12128766 NA Skin, Hair, Eye color NA NA NA NA 1 Intronic NA
Biology of Sex Differences A>G,T European Spanish CTNNBIP1 rs2379107 NA Hair color NA NA NA NA 1 Intronic NA
Biology of Sex Differences A>G European Spanish CTNNBIP1 rs4846104 NA Eye color NA NA NA NA 1 NA NA
Biology of Sex Differences A>C,G,T European Spanish EDNRB, POU4F1 rs3818416 NA Hair color NA NA NA NA 13 Intronic NA
Biology of Sex Differences C>A,T European Spanish F2RL1 rs2243010 NA Eye color NA NA NA NA 5 Intronic NA
Biology of Sex Differences C>A,G,T European Spanish GNA11 rs10407783 NA Eye color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>C European Spanish GNA11 rs2238625 NA Hair color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>A,C,G European Spanish GNA11 rs308039 NA Hair color NA NA NA NA 19 Intronic NA
Biology of Sex Differences G>A,T European Spanish GNA11 rs3786947 NA Hair color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>A,C,G European Spanish GNA11 rs404632 NA Eye color NA NA NA NA 19 Intronic NA
Biology of Sex Differences T>A,C,G European Spanish GNAQ rs10781468 NA Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences A>T European Spanish GNAQ rs17786974 NA Hair color NA NA NA NA 9 Intronic NA
Biology of Sex Differences T>C European Spanish GNAQ rs2296937 NA Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences C>T European Spanish GNAQ rs3780302 NA Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences C>A,T European Spanish GNAQ rs3858119 NA Skin color NA NA NA NA 9 3 prime UTR NA
Biology of Sex Differences C>T European Spanish GNAQ rs4745672 NA Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences G>A,T European Spanish GNAS rs12625436 NA Skin color NA NA NA NA 20 Intronic NA
Biology of Sex Differences A>C,G,T European Spanish GNAS rs13831 NA Skin color NA NA NA NA 20 Intronic NA
Biology of Sex Differences G>A European Spanish GNAS rs234623 NA Skin color NA NA NA NA 20 NA NA
Biology of Sex Differences T>C European Spanish GNAS rs6026561 NA Skin color NA NA NA NA 20 Intronic NA
Biology of Sex Differences A>C European Spanish GNAS rs6092704 NA Skin color NA NA NA NA 20 Intronic NA
Biology of Sex Differences T>A,C European Spanish GNAS rs6123832 NA Skin, Hair, Eye color NA NA NA NA 20 Intronic NA
Biology of Sex Differences G>A,C European Spanish GPR143 rs2521667 NA Hair color NA NA NA NA X Intronic NA
Biology of Sex Differences A>C,G European Spanish HPS1 rs1061135 NA Hair color NA NA NA NA 10 Intronic NA
Biology of Sex Differences A>G European Spanish HPS1 rs1739 NA Skin color NA NA NA NA 10 Intronic NA
Biology of Sex Differences G>A,C,T European Spanish HPS1 rs1886728 NA Hair color NA NA NA NA 10 Intronic NA
Biology of Sex Differences G>A,T European Spanish HPS1 rs7921146 NA Skin color NA NA NA NA 10 Intronic NA
Biology of Sex Differences C>G,T European Spanish HPS4 rs17401652 NA Eye color NA NA NA NA 22 Intronic NA
Biology of Sex Differences G>A European Spanish HPS4 rs3747129 NA Skin color NA NA NA NA 22 Intronic NA
Biology of Sex Differences A>G,T European Spanish HPS4 rs9608491 NA Skin color NA NA NA NA 22 Intronic NA
Biology of Sex Differences T>C European Spanish HPS5 rs12218 NA Skin color NA NA NA NA 11 Exonic Synonymous
Biology of Sex Differences T>A,C European Spanish HPS5 rs2049129 NA Hair color NA NA NA NA 11 Intronic NA
Biology of Sex Differences T>A European Spanish HPS5 rs2305564 NA Hair color NA NA NA NA 11 Intronic NA
Biology of Sex Differences A>G,T European Spanish HPS5 rs7131332 NA Skin color NA NA NA NA 11 NA NA
Biology of Sex Differences G>A European Spanish HPS6 rs3737243 NA Skin color NA NA NA NA 10 Exonic Synonymous
Biology of Sex Differences T>C,G European Spanish HPS6 rs3816 NA Eye color NA NA NA NA 10 3 prime UTR NA
Biology of Sex Differences C>G European Spanish HPS6 rs6584475 NA Eye color NA NA NA NA 10 Intronic NA
Biology of Sex Differences G>A European Spanish HRK rs884378 NA Skin color NA NA NA NA 12 Intronic NA
Biology of Sex Differences T>C,G European Spanish KIT rs1008658 NA Skin color NA NA NA NA 4 Intronic NA
Biology of Sex Differences T>C European Spanish KIT rs13135792 NA Hair color NA NA NA NA 4 Intronic NA
Biology of Sex Differences T>C,G European Spanish KIT rs2237025 NA Hair color NA NA NA NA 4 Intronic NA
Biology of Sex Differences A>G European Spanish KIT rs2298976 NA Skin color NA NA NA NA 4 Intronic NA
Biology of Sex Differences G>T European Spanish KIT rs4864920 NA Eye color NA NA NA NA 4 Intronic NA
Biology of Sex Differences G>A,T European Spanish KIT rs6554198 NA Hair color NA NA NA NA 4 Exonic NA
Biology of Sex Differences C>G,T European Spanish KIT rs759083 NA Hair color NA NA NA NA 4 Intronic NA
Biology of Sex Differences G>A,T European Spanish KITLG rs10858753 NA Skin color NA NA NA NA 12 Intronic NA
Biology of Sex Differences T>C,G European Spanish LYST rs6429238 NA Eye color NA NA NA NA 1 Intronic NA
Biology of Sex Differences A>G,T European Spanish LYST rs6699717 NA Eye color NA NA NA NA 1 NA NA
Biology of Sex Differences C>T European Spanish LYST rs7541057 NA Eye color NA NA NA NA 1 Intronic NA
Biology of Sex Differences T>A,C European Spanish MCAM rs2249466 NA Eye color NA NA NA NA 11 Exonic Synonymous
Biology of Sex Differences T>C,G European Spanish MCAM rs2511837 NA Eye color NA NA NA NA 11 Exonic NA
Biology of Sex Differences G>A,C European Spanish MCAM rs6589732 NA Skin color NA NA NA NA 11 Intronic NA
Biology of Sex Differences C>A,T European Spanish MCOLN3 rs10782537 NA Skin color NA NA NA NA 1 3 prime UTR NA
Biology of Sex Differences C>T European Spanish MCOLN3 rs12030837 NA Eye color NA NA NA NA 1 NA NA
Biology of Sex Differences C>A European Spanish MCOLN3 rs12735211 NA Hair color NA NA NA NA 1 Intronic NA
Biology of Sex Differences C>T European Spanish MCOLN3 rs2304641 NA Skin color NA NA NA NA 1 Intronic NA
Biology of Sex Differences T>C European Spanish MCOLN3 rs6674050 NA Eye, Hair color NA NA NA NA 1 Exonic NA
Biology of Sex Differences C>T European Spanish MITF rs11128152 NA Eye color NA NA NA NA 3 Intronic NA
Biology of Sex Differences T>A,C,G European Spanish MLANA rs1056796 NA Hair, Skin color NA NA NA NA 9 Intronic NA
Biology of Sex Differences T>C European Spanish MLANA rs10758717 NA Hair color NA NA NA NA 9 Intronic NA
Biology of Sex Differences G>A,C,T European Spanish MLANA rs2150702 NA Hair color NA NA NA NA 9 Intronic NA
Biology of Sex Differences T>A,C European Spanish MLANA rs7872509 NA Hair color NA NA NA NA 9 Intronic NA
Biology of Sex Differences A>G European Spanish MLPH rs10173589 NA Hair color NA NA NA NA 2 Intronic NA
Biology of Sex Differences G>A,C,T European Spanish MLPH rs13383648 NA Skin color NA NA NA NA 2 Intronic NA
Biology of Sex Differences A>C,G,T European Spanish MUTED rs2743989 NA Hair color NA NA NA NA 6 Intronic NA
Biology of Sex Differences T>C European Spanish MUTED rs2748376 NA Skin color NA NA NA NA 6 Intronic NA
Biology of Sex Differences T>A,C,G European Spanish MUTED rs2815155 NA Skin color NA NA NA NA 6 Intronic NA
Biology of Sex Differences T>A,C European Spanish MYO7A rs762667 NA Skin color NA NA NA NA 11 Exonic Synonymous
Biology of Sex Differences G>C European Spanish MYO7A rs948970 NA Hair color NA NA NA NA 11 Intronic NA
Biology of Sex Differences G>A European Spanish NF1 rs1013948 NA Hair color NA NA NA NA 17 Intronic NA
Biology of Sex Differences G>A European Spanish NF1 rs10438801 NA Skin color NA NA NA NA 17 Intronic NA
Biology of Sex Differences C>A,G,T European Spanish NF1 rs2953016 NA Hair color NA NA NA NA 17 Intronic NA
Biology of Sex Differences G>A European Spanish NRAS rs14804 NA Hair color NA NA NA NA 1 3 Prime UTR NA
Biology of Sex Differences A>G,T European Spanish PAX3 rs12623857 NA Skin color NA NA NA NA 2 Exonic Synonymous
Biology of Sex Differences A>G,T European Spanish PAX3 rs16863657 NA Skin color NA NA NA NA 2 Intronic NA
Biology of Sex Differences C>A,T European Spanish PLDN rs12909221 NA Skin color NA NA NA NA 15 NA NA
Biology of Sex Differences A>G European Spanish POMC rs934778 NA Skin color NA NA NA NA 2 Intronic NA
Biology of Sex Differences G>A,C,T European Spanish PRKAR1A rs8066131 NA Eye color NA NA NA NA 17 Intronic NA
Biology of Sex Differences C>G European Spanish PTCH2 rs3795719 NA Skin color NA NA NA NA 1 Intronic NA
Biology of Sex Differences A>C,G European Spanish RAB27A rs11071175 NA Skin color NA NA NA NA 15 Intronic NA
Biology of Sex Differences C>T European Spanish RAB27A rs17238192 NA Skin color NA NA NA NA 15 Intronic NA
Biology of Sex Differences C>T European Spanish RAB27A rs7167572 NA Skin color NA NA NA NA 15 Intronic NA
Biology of Sex Differences C>A,T European Spanish RAB27A rs7496857 NA Skin color NA NA NA NA 15 Intronic NA
Biology of Sex Differences C>A European Spanish RAB38 rs1027027 NA Hair color NA NA NA NA 11 Intronic NA
Biology of Sex Differences C>A,T European Spanish RAB38 rs9666730 NA Hair color NA NA NA NA 11 Intronic NA
Biology of Sex Differences C>T European Spanish RABGGTA rs3940231 NA Skin color NA NA NA NA 14 Intronic NA
Biology of Sex Differences C>A,G,T European Spanish RGS1 rs1359062 NA Hair, Skin color NA NA NA NA 1 Intronic NA
Biology of Sex Differences T>C,G European Spanish RGS20 rs10958392 NA Hair color NA NA NA NA 8 Intronic NA
Biology of Sex Differences C>T European Spanish RGS20 rs11783925 NA Eye color NA NA NA NA 8 Intronic NA
Biology of Sex Differences C>A,G,T European Spanish RGS20 rs6981243 NA Skin color NA NA NA NA 8 Intronic NA
Biology of Sex Differences G>A,T European Spanish RGS20 rs7824575 NA Hair color NA NA NA NA 8 Intronic NA
Biology of Sex Differences T>C European Spanish SLC45A2 rs35414 NA Hair, Skin color NA NA NA NA 5 Intronic NA
Biology of Sex Differences A>C,G,T European Spanish SLC45A2 rs35415 NA Hair, Skin color NA NA NA NA 5 Intronic NA
Biology of Sex Differences T>A,C,G European Spanish SNAI2 rs1992375 NA Skin color NA NA NA NA 8 Intronic NA
Biology of Sex Differences T>C European Spanish SNAI2 rs2735455 NA Skin color NA NA NA NA 8 Exonic NA
Biology of Sex Differences G>T European Spanish SNX10 rs1406754 NA Skin color NA NA NA NA 7 Intronic NA
Biology of Sex Differences C>A,G,T European Spanish SNX10 rs2699808 NA Skin color NA NA NA NA 7 Intronic NA
Biology of Sex Differences A>G European Spanish SOX11 rs17362772 NA Hair color NA NA NA NA 2 Intronic NA
Biology of Sex Differences T>A,G European Spanish SOX11 rs6432221 NA Eye color NA NA NA NA 2 Intronic NA
Biology of Sex Differences A>G,T European Spanish SOX4 rs9368326 NA Eye, Skin color NA NA NA NA 6 NA NA
Biology of Sex Differences C>A European Spanish TYR rs1042602 NA Eye color NA NA NA NA 11 Exonic NA
Biology of Sex Differences T>A,C European Spanish TYR rs12270717 NA Eye color NA NA NA NA 11 Intronic NA
Biology of Sex Differences C>T European Spanish TYR rs17793678 NA Eye color NA NA NA NA 11 Intronic NA
Biology of Sex Differences C>G,T European Spanish TYR rs2186640 NA Eye color NA NA NA NA 11 Intronic NA
Biology of Sex Differences G>C,T European Spanish TYR rs5021654 NA Eye color NA NA NA NA 11 Exonic NA
Biology of Sex Differences A>C,G,T European Spanish TYRP1 rs10809828 NA Eye color NA NA NA NA 9 Intronic NA
Biology of Sex Differences C>A,G European Spanish WNT3A rs708122 NA Hair color NA NA NA NA 1 Intronic NA
63 Mishra et al. Journal of Investigative Dermatology 2017 A>G,T South Asian Indian SLC24A5 rs1426654 NA Skin color NA NA NA 4.49E-07 15 Exonic NA
Journal of Investigative Dermatology A>C,G South Asian Indian SLC24A5 rs2470102 NA Skin color NA NA NA 5.79E-07 15 Intronic NA
64 Sarkar et al. American Journal of Human Biology 2017 C>G South Asian Indian SLC45A2 rs16891982 NA Skin color NA NA NA NA 5 Exonic Missence
American Journal of Human Biology C>T South Asian Indian SLC45A2 rs26722 NA Skin color NA NA NA NA 5 Intronic NA
American Journal of Human Biology C>G South Asian Indian SLC45A2 rs13289 NA Skin color NA NA NA NA 5 3 prime UTR NA
American Journal of Human Biology C>T South Asian Indian SLC45A2 rs12203592 NA Skin color NA NA NA NA 6 Intronic NA
American Journal of Human Biology C>T South Asian Indian TYRP1 rs1408799 NA Skin color NA NA NA NA 9 NA NA
American Journal of Human Biology C>A South Asian Indian TYR rs1042602 NA Skin color NA NA NA NA 11 Exonic NA
American Journal of Human Biology C>T South Asian Indian TYR rs12295166 NA Skin color NA NA NA NA 11 Intronic NA
American Journal of Human Biology G>A South Asian Indian TYR rs1393350 NA Skin color NA NA NA NA 11 Intronic NA
American Journal of Human Biology A>G South Asian Indian TYR rs1126809 Arg402Gln Skin color NA NA NA NA 11 Exonic Missence
American Journal of Human Biology A>G South Asian Indian DCT rs2031526 NA Skin color NA NA NA NA 13 Intronic NA
American Journal of Human Biology C>T South Asian Indian OCA2 rs1800407 Arg419Gln Skin color NA NA NA NA 15 Exonic Missence
American Journal of Human Biology A>G South Asian Indian OCA2 rs1800404 NA Skin color NA NA NA 2.00E-03 15 Exonic Synonymous
American Journal of Human Biology G>A South Asian Indian OCA2 rs1800401 Arg305Trp Skin color NA NA NA NA 15 Exonic Missence
American Journal of Human Biology C>T South Asian Indian OCA2 rs4778231 NA Skin color NA NA NA NA 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian OCA2 rs1375164 NA Skin color NA NA NA 1.00E-03 15 Intronic NA
American Journal of Human Biology A>G South Asian Indian OCA2 rs7495174 NA Skin color NA NA NA NA 15 Intronic NA
American Journal of Human Biology A>G South Asian Indian HERC2 rs1291383 NA Skin color NA NA NA NA 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian SLC24A5 rs2924566 NA Skin color NA NA NA 2.24E-08 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian SLC24A5 rs4775730 NA Skin color NA NA NA 1.41E-10 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian SLC24A5 rs1742659 NA Skin color NA NA NA NA 15 Intronic NA
American Journal of Human Biology A>G South Asian Indian SLC24A5 rs1426654 NA Skin color NA NA NA 5.12E-09 15 Exonic NA
American Journal of Human Biology A>T South Asian Indian MYEF2 rs11070627 NA Skin color NA NA NA 1.13E-12 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian CTXN2 rs12913316 NA Skin color NA NA NA 8.33E-13 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian DUT rs11637235 NA Skin color NA NA NA 1.63E-10 15 Intronic NA
American Journal of Human Biology G>T South Asian Indian CEP152 rs8041414 NA Skin color NA NA NA NA 15 Intronic NA
American Journal of Human Biology C>T South Asian Indian ATRN rs17782078 NA Skin color NA NA NA NA 20 Exonic Missence
American Journal of Human Biology C>T South Asian Indian ATRN rs3886999 NA Skin color NA NA NA NA 20 Exonic Missence
American Journal of Human Biology G>T South Asian Indian ASIP rs4911414 NA Skin color NA NA NA 2.00E-03 20 NA NA
American Journal of Human Biology A>G South Asian Indian ASIP rs1015362 NA Skin color NA NA NA NA 20 NA NA
American Journal of Human Biology C>G South Asian Indian ASIP rs6119471 NA Skin color NA NA NA NA 20 Intronic NA
65 Crawford et al. Science 2017 T>C African African CTXN2 rs2413887 NA Skin color NA NA NA 4.90E-62 15 Intronic NA
Science G>A African African SLC24A5 rs1426654 NA Skin color NA NA NA 5.50E-62 15 Exonic NA
Science G>A African African SLC24A5 rs1834640 NA Skin color NA NA NA 3.20E-61 15 NA NA
Science G>A African African SLC24A5 rs2675345 NA Skin color NA NA NA 6.70E-61 15 Intronic NA
Science G>A African African MYEF2 rs8028919 NA Skin color NA NA NA 5.00E-32 15 Intronic NA
Science C>T African Nilo Saharan MFSD12 rs10424065 NA Skin color NA NA NA 5.10E-20 19 Intronic NA
Science C>T African African MFSD12 rs56203814 NA Skin color NA NA NA 3.60E-18 19 Exonic Synonymous
Science C>T African African HMG20B s111317445 NA Skin color NA NA NA 1.70E-16 19 NA NA
Science C>T African African MFSD12 rs10414812 NA Skin color NA NA NA 3.80E-16 19 Exonic Missence
Science T>C African African HMG20B rs112332856 NA Skin color NA NA NA 3.80E-16 19 NA NA
Science G>A African African MFSD12 rs6510760 NA Skin color NA NA NA 6.50E-15 19 intragenic NA
Science T>G African African MFSD12 rs73527942 NA Skin color NA NA NA 4.80E-14 19 Intronic NA
Science C>T African African MFSD12 rs142317543 NA Skin color NA NA NA 5.00E-14 19 Intronic NA
Science C>T African African HMG20B rs7254463 NA Skin color NA NA NA 9.00E-09 19 NA NA
Science C>T African African HMG20B rs7246261 NA Skin color NA NA NA 1.10E-08 19 NA NA
Science T>C African African HMG20B rs6510761 NA Skin color NA NA NA 2.20E-08 19 NA NA
Science A>T African Nilo Saharan TMEM138 rs7948623 NA Skin color NA NA NA 2.20E-11 11 Intronic NA
Science C>T African African TMEM216 rs4453253 NA Skin color NA NA NA 5.40E-11 11 NA NA
Science C>T African African TMEM216 rs4939520 NA Skin color NA NA NA 1.40E-10 11 NA NA
Science C>T African African TMEM138 rs4939519 NA Skin color NA NA NA 2.80E-10 11 Intronic NA
Science C>T African African TKFC rs2512809 NA Skin color NA NA NA 7.40E-10 11 Intronic NA
Science T>C African African VWCE rs11230658 NA Skin color NA NA NA 9.40E-10 11 Intronic NA
Science G>A African African DDB1 rs12289370 NA Skin color NA NA NA 1.30E-09 11 Intronic NA
Science C>A African African TMEM138 rs1377457 NA Skin color NA NA NA 1.50E-09 11 Exonic NA
Science G>T African African DDB1 rs7934735 NA Skin color NA NA NA 1.50E-09 11 Intronic NA
Science G>A African African TMEM138 rs7394502 NA Skin color NA NA NA 1.60E-09 11 NA NA
Science C>T African African TMEM138 rs10897155 NA Skin color NA NA NA 1.60E-09 11 Intronic NA
Science G>A African African TMEM138 rs11230678 NA Skin color NA NA NA 1.70E-09 11 Intronic NA
Science NA African African TKFC rs148172827 NA Skin color NA NA NA 1.80E-09 11 NA NA
Science C>T African African TMEM138 rs1377458 NA Skin color NA NA NA 2.10E-09 11 Exonic NA
Science C>T African sub Saharan DDB1 rs11230664 NA Skin color NA NA NA 2.10E-09 11 Intronic NA
Science G>A African African CYB561A3 rs7951574 NA Skin color NA NA NA 2.80E-09 11 Intronic NA
Science A>C African African VWCE rs1108769 NA Skin color NA NA NA 3.00E-09 11 Intronic NA
Science T>C African African TMEM138 rs57265008 NA Skin color NA NA NA 3.70E-09 11 Intronic NA
Science G>A African African SDHAF2 rs3017597 NA Skin color NA NA NA 5.40E-09 11 NA NA
Science T>C African African DDB1 rs12275843 NA Skin color NA NA NA 5.50E-09 11 Intronic NA
Science G>C African African VWCE rs73490303 NA Skin color NA NA NA 7.20E-09 11 Intronic NA
Science A>G African African PGA5 rs653173 NA Skin color NA NA NA 8.20E-09 11 3 prime UTR NA
Science G>T African African VWCE rs10897150 NA Skin color NA NA NA 8.80E-09 11 Exonic NA
Science G>A African African TKFC rs2260655 NA Skin color NA NA NA 9.00E-09 11 Exonic Missence
Science C>A African African TMEM216 rs12791961 NA Skin color NA NA NA 9.70E-09 11 NA NA
Science T>C African African DDB1 rs7120594 NA Skin color NA NA NA 1.20E-08 11 Intronic NA
Science G>C African African VWCE rs9704187 NA Skin color NA NA NA 1.30E-08 11 Intronic NA
Science G>C African African VWCE rs2513329 NA Skin color NA NA NA 1.60E-08 11 Exonic Synonymous
Science T>A African African VWCE rs2001746 NA Skin color NA NA NA 1.70E-08 11 Intronic NA
Science C>T African Ethiopian TKFC rs2305465 NA Skin color NA NA NA 1.80E-08 11 Exonic Synonymous
Science C>T African Ethiopian TKFC rs2305465 NA Skin color NA NA NA 1.80E-08 11 Exonic Synonymous
Science C>T African African HERC2 rs4932620 NA Skin color NA NA NA 3.20E-09 15 Intronic NA
Science C>T African African HERC2 rs1667393 NA Skin color NA NA NA 6.30E-09 15 Intronic NA
Science C>T African African HERC2 rs1635167 NA Skin color NA NA NA 8.90E-09 15 Intronic NA
Science A>G African African HERC2 rs2905952 NA Skin color NA NA NA 9.00E-09 15 Intronic NA
Science T>G African African HERC2 rs12915877 NA Skin color NA NA NA 1.10E-08 15 Intronic NA
Science G>A African African HERC2 rs4932618 NA Skin color NA NA NA 1.60E-08 15 Intronic NA
Science C>T African African OCA2 rs1800404 NA Skin color NA NA NA 1.60E-08 15 Exonic Synonymous
Science G>A African African OCA2 rs1868333 NA Skin color NA NA NA 2.20E-08 15 Intronic NA
Science A>G African African OCA2 rs735066 NA Skin color NA NA NA 3.50E-08 15 Intronic NA

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